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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017163.1_8531_8610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8531 - 8610

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

TGTCCCTTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCGTCCTCACCC

Flanking Amino Acid:

GLRDPLMTHWEPQVPLPVSE

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

69.5

42.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

78.4

0.64

0.8

72.8

31.9

Minor 5ss

-2.3

3.2

31.4

42.6

Minor BPS

49.4

-0

1.9

57.89

Associated Gene:

Gene:

HLA-DRA

Ensembl Gene ID:

ENSAPLG00000005101

Chromosome:

PEDO01017163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005285

8376 - 9782

1407