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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017163.1_8893_9087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8893 - 9087

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

CCACCTCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

CCTTCTCCACCT

Flanking Amino Acid:

KRSNRSQGTIAPPEVTVFSE

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

63.8

40.9

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

71.4

0.48

0.8

61.6

34.7

Minor 5ss

40.8

-1

2.9

54.8

42.1

Minor BPS

44.9

-0.3

2.1

64.17

46.4

Associated Gene:

Gene:

HLA-DRA

Ensembl Gene ID:

ENSAPLG00000005101

Chromosome:

PEDO01017163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005285

8376 - 9782

1407