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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_1434_1511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1434 - 1511

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGAAAC

U12 Branch Point Sequence:

TCTTCCCTCACC

Flanking Amino Acid:

MPAFSLPYAQLQAMPAASGV

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

44.9

-0.3

1.1

46.3

Major PPT

73.8

0.54

0.9

66.7

34.2

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

59.5

0.28

2.1

75.12

41.7

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288