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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_1653_1818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1653 - 1818

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

GTTGTTGCCACA

Flanking Amino Acid:

KLEIMRQKKQEYLEMQRQLA

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

71.5

0.48

64.8

41.4

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

37.3

-1

2.3

50.9

41.3

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288