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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_2373_2512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2373 - 2512

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

ATGTCCTTGACC

Flanking Amino Acid:

AHPTPLGVVEQQYQNGESEE

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

73.9

0.54

0.8

65.1

36.3

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

79.6

0.91

1.1

80.15

34.9

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288