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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_2657_2741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2657 - 2741

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGGTGCTCATTT

Flanking Amino Acid:

APLAEDIDPELARYLNRNYW

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

79.7

0.74

79.6

35.6

Major PPT

0.58

0.9

72.7

32.1

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

45.7

-0.2

2.1

64.67

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288