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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_273_345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

273 - 345

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCGCCCTGACG

Flanking Amino Acid:

LPGQQPLYQQVPPAGAAPQQ

Intron Amino Acid Position:

692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

77.4

0.62

0.7

72.3

25.8

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

46.6

-0.4

1.9

47.81

45.6

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013220

21 - 8308

8288