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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_3237_3350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3237 - 3350

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTACA

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAC

U12 Branch Point Sequence:

GGTCCCTGAGTT

Flanking Amino Acid:

QSEAEEKERMRQKTSYSMYP

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

67.2

37.5

Major BPS

62.5

0.31

1.1

54.8

42.1

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

38.6

-1.3

2.3

41.7

38.6

Minor BPS

50.8

0.1

1.7

68.64

41.7

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288