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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_3450_3536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3450 - 3536

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

CCTTTATTGACT

Flanking Amino Acid:

LTSPLSQQSQLPPKRDETAL

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

0.43

1.7

75.44

41.7

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288