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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_3616_3815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3616 - 3815

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGTACC

5'SS Class:

major

3'SS Sequence:

TTTCTGACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TCTTTCTGACTG

Flanking Amino Acid:

VCEPCYEHLNKKAEGKAAAT

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.3

72.6

37.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.4

0.68

0.9

74.4

35.1

Minor 5ss

34.1

-1.8

2.6

39.5

31.5

Minor BPS

50.5

-0.1

1.8

59.15

43.4

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288