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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_3941_4104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3941 - 4104

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TGCTGCCACACT

Flanking Amino Acid:

RVQFGVVTRKHHCRACGQIF

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

71.2

0.53

37.5

Major PPT

81.7

0.71

0.8

76.1

32.4

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

39.4

-0.7

2.5

60.77

48.5

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013220

21 - 8308

8288

ENSAPLT00000046582

331 - 8308

7978