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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_4174_4625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4174 - 4625

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTAACCCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GTTTCCTTAACC

Flanking Amino Acid:

ESDAMFAAERAPDWVDAEEC

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

69.7

0.49

59.9

38.5

Major PPT

63.4

0.3

55.5

40.9

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

1.27

0.8

91.71

27.5

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046582

331 - 8308

7978

ENSAPLT00000013220

21 - 8308

8288