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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017168.1_4679_5055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4679 - 5055

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

AAGCCTTTCACA

Flanking Amino Acid:

QDTYQIMKVEGHVFPEFKES

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

77.7

0.69

30.2

Major PPT

0.63

0.7

72.1

26.2

Minor 5ss

23.1

-3.1

3.2

Minor BPS

51.2

0.03

1.7

60.24

39.7

Associated Gene:

Gene:

HGS

Ensembl Gene ID:

ENSAPLG00000012661

Chromosome:

PEDO01017168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013220

21 - 8308

8288

ENSAPLT00000046582

331 - 8308

7978