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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017173.1_352_1113_R

Intron Information:

Intron Rank:

155362

Intron Class:

major

Intron Phase:

Intron Coordinates:

352 - 1113

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

CTGCCGGCAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.2

39.3

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

83.5

0.75

0.8

77.1

31.6

Minor 5ss

29.7

-2.3

3.5

37.8

42.4

Minor BPS

34.4

-1.1

2.6

53.19

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031080

Chromosome:

PEDO01017173.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035087

21 - 2455

2435