Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017229.1_847_920_F

Intron Information:

Intron Rank:

150687

Intron Class:

major

Intron Phase:

Intron Coordinates:

847 - 920

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

CCTCCTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCCTCCTCACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

49.8

46.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

69.6

0.44

0.9

61.4

33.9

Minor 5ss

27.1

-2.6

3.6

28.8

43.7

Minor BPS

49.4

-0

1.9

57.93

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030953

Chromosome:

PEDO01017229.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024137

21 - 1138

1118