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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017238.1_546_1999_F

Intron Information:

Intron Rank:

143904

Intron Class:

major

Intron Phase:

Intron Coordinates:

546 - 1999

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GACATCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.3

39.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.9

0.67

0.8

77.3

35.6

Minor 5ss

37.6

-1.4

3.2

48.7

47.5

Minor BPS

63.6

0.51

1.3

70.23

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027560

Chromosome:

PEDO01017238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023960

21 - 4177

4157