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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017261.1_495_685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

495 - 685

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

ACTTTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

TTTCCCTCCACC

Flanking Amino Acid:

LLKAACLDILILRICTRYTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

0.9

61.3

37.5

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

75.4

0.57

0.8

66.5

Minor 5ss

25.4

-2.8

3.1

27.6

37.3

Minor BPS

59.6

0.28

76.58

39.5

Associated Gene:

Gene:

RARA

Ensembl Gene ID:

ENSAPLG00000021187

Chromosome:

PEDO01017261.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017316

21 - 1057

1037