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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017275.1_1345_1523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1345 - 1523

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTCTCCTCACGC

Flanking Amino Acid:

RRQGLQQFLEKVVQNVVLLS

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

74.1

0.54

0.8

69.4

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

46.5

-0.2

2.1

57.93

47.1

Associated Gene:

Gene:

SNX11

Ensembl Gene ID:

ENSAPLG00000007952

Chromosome:

PEDO01017275.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041388

21 - 2540

2520

ENSAPLT00000008243

505 - 1983

1479