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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017279.1_938_1177_F

Intron Information:

Intron Rank:

135946

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

938 - 1177

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-TC

5'SS Sequence:

CTG|GTGACCGTT

5'SS Class:

major

3'SS Sequence:

AGCAGTGGTGCTC|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGGGAG

U12 Branch Point Sequence:

CTCGTGGGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.2

64.9

41.1

Major BPS

-0.8

1.7

28.5

45.1

Major PPT

16.6

-1.9

30.7

Minor 5ss

42.5

-0.8

3.5

60.9

46.1

Minor BPS

30.3

-1.5

2.4

38.44

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023207

Chromosome:

PEDO01017279.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027885

21 - 1718

1698