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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017309.1_4554_5019_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4554 - 5019

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGCGCTG

5'SS Class:

weak_major

3'SS Sequence:

GGGTGCCGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTGCAC

U12 Branch Point Sequence:

AGTGCACCGACG

Flanking Amino Acid:

SCTRPPPKNGGTHHDGCNNC

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

52.9

44.1

Major BPS

46.5

-0.2

1.4

54.8

42.1

Major PPT

49.7

-0

1.2

43.3

Minor 5ss

27.7

-2.6

4.4

37.6

47.2

Minor BPS

38.7

-1

2.1

44.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023122

Chromosome:

PEDO01017309.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025683

3944 - 8084

4141