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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017309.1_5490_7486_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5490 - 7486

Intron Length:

1997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGTGTCGG

5'SS Class:

major

3'SS Sequence:

GTGCCAGGGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATGTCCCCACAG

Flanking Amino Acid:

ALQSKTCNTHDCAGLNCSWT

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.3

52.3

46.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

40.4

-0.5

1.7

31.4

41.1

Minor 5ss

35.6

-1.6

2.8

39.5

39.7

Minor BPS

41.1

-0.8

2.1

48.28

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023122

Chromosome:

PEDO01017309.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025683

3944 - 8084

4141