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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017316.1_197_2163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

197 - 2163

Intron Length:

1967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCAGTATTAAAT

Flanking Amino Acid:

LVNKALLSAYRFPSPIFLGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

83.8

0.76

0.9

36.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

49.5

0.04

1.8

66.72

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029226

Chromosome:

PEDO01017316.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027187

21 - 3317

3297