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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017335.1_1109_1770_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1109 - 1770

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTTTCCCC

5'SS Class:

weak_major

3'SS Sequence:

TCTACAGCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAG

U12 Branch Point Sequence:

TCTACAGCAACA

Flanking Amino Acid:

MPSKAAAGSGQMQQAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.4

50.1

Major BPS

48.5

-0

1.6

62.9

43.3

Major PPT

61.8

0.27

55.2

39.1

Minor 5ss

31.3

-2.1

3.8

43.9

43.3

Minor BPS

44.1

-0.4

2.4

61.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028040

Chromosome:

PEDO01017335.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026626

1090 - 2100

1011