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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017350.1_1388_1517_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

1388 - 1517

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GGGCGCTGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

CGTGTTTGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.4

38.7

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

53.7

0.08

1.1

45.8

41.4

Minor 5ss

28.6

-2.5

2.7

27.3

36.3

Minor BPS

44.7

-0.4

1.8

50.57

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027831

Chromosome:

PEDO01017350.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042651

1216 - 6808

5593