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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017350.1_2985_3597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2985 - 3597

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGACGG

5'SS Class:

major

3'SS Sequence:

GCTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGCAC

U12 Branch Point Sequence:

TCCGCCCTAGCA

Flanking Amino Acid:

HKAEDAPMWHVEAWDSAVRA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

55.4

43.5

Major BPS

46.4

-0.2

1.4

55.1

40.4

Major PPT

80.1

0.68

0.8

73.3

31.6

Minor 5ss

28.3

-2.5

3.1

41.1

Minor BPS

47.5

-0.1

59.55

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027831

Chromosome:

PEDO01017350.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026423

532 - 6808

6277

ENSAPLT00000042834

21 - 6808

6788

ENSAPLT00000042651

1216 - 6808

5593

ENSAPLT00000040650

21 - 6808

6788