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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017350.1_4528_5689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4528 - 5689

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCGAC

U12 Branch Point Sequence:

CAGCTCCGACCC

Flanking Amino Acid:

VTLGREARQQAFPAPAAVEV

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

48.6

-0

1.2

47.5

37.7

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

38.6

-0.8

1.8

42.1

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027831

Chromosome:

PEDO01017350.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026423

532 - 6808

6277

ENSAPLT00000042834

21 - 6808

6788

ENSAPLT00000042651

1216 - 6808

5593

ENSAPLT00000040650

21 - 6808

6788