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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017366.1_3913_4887_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3913 - 4887

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGCGGGG

5'SS Class:

weak_major

3'SS Sequence:

CCTCGCTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAA

U12 Branch Point Sequence:

CCTCGCTGCACA

Flanking Amino Acid:

GQPWRLWGWGACPNSCTRVS

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.2

45.7

44.4

Major BPS

46.4

-0.2

1.4

54.9

40.8

Major PPT

0.36

0.9

59.6

35.6

Minor 5ss

27.3

-2.6

3.7

37.3

47.4

Minor BPS

42.6

-0.5

2.2

53.11

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028749

Chromosome:

PEDO01017366.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029360

1980 - 4925

2946