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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017382.1_2378_2480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2378 - 2480

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CCATCCCCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

72.8

0.51

0.7

65.5

30.4

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

49.4

-0

1.9

60.3

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027768

Chromosome:

PEDO01017382.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008018

367 - 2710

2344