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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017403.1_2922_3199_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2922 - 3199

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAGACATC

5'SS Class:

weak_major

3'SS Sequence:

GGATGGGATGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGGGAT

U12 Branch Point Sequence:

ATTCCCTGGATG

Flanking Amino Acid:

KELCDVTSLHLPGAAERP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

53.7

43.5

Major BPS

-0

1.5

48.8

46.3

Major PPT

52.4

0.05

1.2

43.1

46.6

Minor 5ss

44.8

-0.6

3.3

69.4

41.6

Minor BPS

57.1

0.08

1.6

63.3

38.4

Associated Gene:

Gene:

INPP5J

Ensembl Gene ID:

ENSAPLG00000012501

Chromosome:

PEDO01017403.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013012

16 - 3225

3210