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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017412.1_1298_2597_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1298 - 2597

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCGAGGTAC

5'SS Class:

major

3'SS Sequence:

CAAACACGATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

TTGAGACAAACA

Flanking Amino Acid:

LTEEKVAYHMQCGNKELYTY

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

60.6

41.4

Major BPS

62.7

0.32

1.2

33.2

Major PPT

40.9

-0.5

1.6

37.2

39.2

Minor 5ss

21.4

-3.3

3.9

28.4

Minor BPS

38.3

-0.8

2.3

53.88

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026955

Chromosome:

PEDO01017412.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034081

482 - 2753

2272