Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017417.1_3144_3241_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3144 - 3241

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCAAACCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCCCCCCAAACC

Flanking Amino Acid:

RGADLNLKDKLLSTPLHVAT

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

58.1

0.18

0.9

33.9

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

45.1

-0.3

52.17

45.2

Associated Gene:

Gene:

ANKRD2

Ensembl Gene ID:

ENSAPLG00000022310

Chromosome:

PEDO01017417.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036837

2009 - 6829

4821