Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017417.1_5009_5084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5009 - 5084

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

GTCGCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTCCCTCACCC

Flanking Amino Acid:

RLLLAGSGCESTQATVELTV

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

74.3

36.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

67.7

0.4

0.9

57.8

38.5

Minor 5ss

33.3

-1.9

3.4

44.7

43.5

Minor BPS

55.2

0.14

1.9

69.34

41.6

Associated Gene:

Gene:

ANKRD2

Ensembl Gene ID:

ENSAPLG00000022310

Chromosome:

PEDO01017417.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036837

2009 - 6829

4821