Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017417.1_5458_5580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5458 - 5580

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

CTCTCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

CCCCCAGGGACA

Flanking Amino Acid:

VIGIKDSGGDITRLGLIVHK

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.4

38.7

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

0.61

0.7

68.9

31.6

Minor 5ss

-2.5

30.3

36.2

Minor BPS

36.7

-1

2.1

41.32

39.5

Associated Gene:

Gene:

ANKRD2

Ensembl Gene ID:

ENSAPLG00000022310

Chromosome:

PEDO01017417.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036837

2009 - 6829

4821