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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017478.1_1163_2365_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1163 - 2365

Intron Length:

1203

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCATTAAAG

5'SS Class:

weak_major

3'SS Sequence:

GCCTGGCTCTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGGGAT

U12 Branch Point Sequence:

GGGGCTGGGATG

Flanking Amino Acid:

VIEKCDTLLGVWLLPIPLQL

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.4

42.3

Major BPS

47.6

-0.1

1.5

46.5

Major PPT

47.5

-0.1

1.7

53.1

41.6

Minor 5ss

28.2

-2.5

3.8

31.3

42.6

Minor BPS

35.5

-1.2

1.9

31.48

35.2

Associated Gene:

Gene:

BPIFB4

Ensembl Gene ID:

ENSAPLG00000002941

Chromosome:

PEDO01017478.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002976

1 - 3822

3822