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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017478.1_4450_5268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4450 - 5268

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TTTCCCCTCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

86.9

0.83

0.7

80.6

31.5

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

0.23

2.1

77.14

38.6

Associated Gene:

Gene:

BPIFB4

Ensembl Gene ID:

ENSAPLG00000002941

Chromosome:

PEDO01017478.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022296

21 - 6111

6091