Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017478.1_668_1075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

668 - 1075

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTCTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

AGCCACTGAGCC

Flanking Amino Acid:

LVSDQLGFVNSLVPLGLLGS

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.9

38.9

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

70.6

0.46

0.8

61.2

35.1

Minor 5ss

36.9

-1.5

3.3

42.2

Minor BPS

43.5

-0.5

1.8

49.61

39.7

Associated Gene:

Gene:

BPIFB4

Ensembl Gene ID:

ENSAPLG00000002941

Chromosome:

PEDO01017478.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037554

21 - 5027

5007

ENSAPLT00000022296

21 - 6111

6091

ENSAPLT00000002976

1 - 3822

3822