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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017505.1_18720_19266_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18720 - 19266

Intron Length:
547

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTGCGTGCT

5'SS Class:
major

3'SS Sequence:
ACCCTCTCCTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTAAT

U12 Branch Point Sequence:
GTGTGTGTAATG

Flanking Amino Acid:
SRHTPNAYSRFVLENSSRED

Intron Amino Acid Position:
342

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.9
0.54
1.1
66
39.9

Major BPS
66.7
0.41
1.4
69.7
44.2

Major PPT
72.2
0.5
0.8
69.1
30.7

Minor 5ss
28.4
-2.5
3.3
32.5
42.2

Minor BPS
44
-0.5
2.3
51
44.3

Associated Gene:

Gene:
ELMO3

Ensembl Gene ID:

Chromosome:
PEDO01017505.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12708 - 22173
9466

13368 - 22173
8806

14164 - 22173
8010