Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017505.1_20247_20462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20247 - 20462

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTTCTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGGGGCTGAGCG

Flanking Amino Acid:

FRKISSRRRQDKLWYCRLSP

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

0.81

0.8

81.2

30.8

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

38.6

-1

37.67

44.4

Associated Gene:

Gene:

ELMO3

Ensembl Gene ID:

ENSAPLG00000005842

Chromosome:

PEDO01017505.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042537

12708 - 22173

9466

ENSAPLT00000039299

13368 - 22173

8806

ENSAPLT00000006115

14164 - 22173

8010