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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017505.1_5373_6061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5373 - 6061

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGGCCT

5'SS Class:

major

3'SS Sequence:

ACTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

TCTGACTTATTT

Flanking Amino Acid:

AKDGVLDLKLAADTLAVRQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

55.9

42.7

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

0.74

0.8

36.2

Minor 5ss

-2.6

3.4

36.2

42.8

Minor BPS

52.8

0.17

1.9

72.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023922

Chromosome:

PEDO01017505.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042109

5193 - 6175

983