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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017505.1_958_1261_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
958 - 1261

Intron Length:
304

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTCAGTGGA

5'SS Class:
major

3'SS Sequence:
GGTTGTGTTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCCCAC

U12 Branch Point Sequence:
CCCTGCCCACCG

Flanking Amino Acid:
ALEELEAFLGRLREALVQRG

Intron Amino Acid Position:
477

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.3
63.7
42.9

Major BPS
48.9
-0
1.3
58.1
40.4

Major PPT
72.8
0.51
1
65.2
45.5

Minor 5ss
28
-2.5
3
32.8
41.9

Minor BPS
34.8
-1.2
2.2
35.29
45.9

Associated Gene:

Gene:
EXOC3L1

Ensembl Gene ID:

Chromosome:
PEDO01017505.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4215
4195

21 - 4215
4195