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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017525.1_6065_6514_F

Intron Information:

Intron Rank:

149808

Intron Class:

major

Intron Phase:

Intron Coordinates:

6065 - 6514

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TTACCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTGATTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.2

35.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

83.7

0.76

0.8

81.2

30.5

Minor 5ss

32.6

-2

3.7

46.4

48.9

Minor BPS

57.5

0.31

1.9

80.33

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030600

Chromosome:

PEDO01017525.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023910

5714 - 7389

1676