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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017529.1_1265_1408_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1265 - 1408

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGCGTAGT

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTGGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

CGGCAGCTGACT

Flanking Amino Acid:

GEIPFLGGVSFIISGCLSIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.3

60.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

73.4

0.53

68.4

37.3

Minor 5ss

32.8

-2

46.2

42.5

Minor BPS

37.5

-0.9

2.3

51.14

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021542

Chromosome:

PEDO01017529.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042424

964 - 2253

1290