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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017545.1_895_1356_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

895 - 1356

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCCAGCAGG

5'SS Class:

weak_major

3'SS Sequence:

AGGTGACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCGGTGTTGATG

Flanking Amino Acid:

YNCALVNSTDKGAGEHGRRK

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

51.6

45.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

61.7

0.26

52.3

42.4

Minor 5ss

26.1

-2.7

3.7

37.2

40.9

Minor BPS

42.8

-0.7

2.1

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027979

Chromosome:

PEDO01017545.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024724

98 - 1412

1315