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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017586.1_54058_54389_F

Intron Information:

Intron Rank:

138156

Intron Class:

major

Intron Phase:

Intron Coordinates:

54058 - 54389

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAAGGCG

5'SS Class:

major

3'SS Sequence:

TGCTTTTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TTGCTTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.3

55.8

40.2

Major BPS

74.9

0.62

67.3

39.2

Major PPT

72.2

0.5

66.7

43.1

Minor 5ss

24.3

-3

3.2

30.4

42.9

Minor BPS

71.4

0.65

1.2

75.03

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024304

Chromosome:

PEDO01017586.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047215

48268 - 54517

6250