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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017600.1_3140_4102_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3140 - 4102

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATCAC

U12 Branch Point Sequence:

CGAGCATCACCT

Flanking Amino Acid:

AIMIVRRAIKNDSVVAGGGA

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

49.2

-0

1.3

53.6

41.6

Major PPT

0.85

0.7

80.3

31.8

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

41.4

-0.5

54.98

46.2

Associated Gene:

Gene:

CCT7

Ensembl Gene ID:

ENSAPLG00000014343

Chromosome:

PEDO01017600.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014994

1594 - 13386

11793