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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017600.1_5737_6771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5737 - 6771

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TCTAACACCACT

Flanking Amino Acid:

NAEVRVNTVQDYQAIVDAEW

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

72.3

0.55

73.3

28.9

Major PPT

71.8

0.49

0.9

65.2

36.3

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

-0.6

2.3

63.17

46.2

Associated Gene:

Gene:

CCT7

Ensembl Gene ID:

ENSAPLG00000014343

Chromosome:

PEDO01017600.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014994

1594 - 13386

11793