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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017619.1_76_602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76 - 602

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACGGGGC

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTCAC

U12 Branch Point Sequence:

GTCACGCTGAGT

Flanking Amino Acid:

WGCCPLEQVGGRVLPRPRAL

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

66.3

39.1

Major BPS

46.8

-0.2

1.4

48.8

46.3

Major PPT

68.4

0.42

0.9

58.4

38.4

Minor 5ss

17.7

-3.7

4.1

37.7

Minor BPS

39.2

-0.7

2.4

57.32

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022960

Chromosome:

PEDO01017619.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024878

2 - 2403

2402