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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017642.1_686_2065_F

Intron Information:

Intron Rank:

145851

Intron Class:

major

Intron Phase:

Intron Coordinates:

686 - 2065

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAC

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

57.1

0.18

1.3

51.8

43.6

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028601

Chromosome:

PEDO01017642.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026934

21 - 2546

2526