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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017644.1_3679_3891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3679 - 3891

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CGGTGTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

AATTTCTGCACC

Flanking Amino Acid:

QERDLLEQHGEVAYERTLSV

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

52.1

0.05

1.9

66.63

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029040

Chromosome:

PEDO01017644.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035165

3363 - 4765

1403