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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017650.1_4916_5072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4916 - 5072

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ATCATCTCAACG

Flanking Amino Acid:

KFMPPPTYTEVDPCVANNNV

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

77.3

0.61

0.8

69.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

53.8

-0

1.7

58.47

43.1

Associated Gene:

Gene:

TXNIP

Ensembl Gene ID:

ENSAPLG00000005479

Chromosome:

PEDO01017650.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005679

3939 - 7922

3984